Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24■■□□□ 1.43
Gm4340L7N2C4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24■■□□□ 1.43
Gm4340L7N2C4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
Gm4340L7N2C4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24■■□□□ 1.43
Gm4340L7N2C4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Gm4340L7N2C4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Gm4340L7N2C4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gm4340L7N2C4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gm4340L7N2C4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
Gm4340L7N2C4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Gm4340L7N2C4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.96■■□□□ 1.43
Gm4340L7N2C4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.96■■□□□ 1.43
Gm4340L7N2C4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm4340L7N2C4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.96■■□□□ 1.43
Gm4340L7N2C4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Gm4340L7N2C4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Gm4340L7N2C4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.95■■□□□ 1.42
Gm4340L7N2C4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Gm4340L7N2C4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
Gm4340L7N2C4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Gm4340L7N2C4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Gm4340L7N2C4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Gm4340L7N2C4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm4340L7N2C4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm4340L7N2C4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Gm4340L7N2C4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Gm4340L7N2C4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Gm4340L7N2C4 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.92■■□□□ 1.42
Gm4340L7N2C4 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.92■■□□□ 1.42
Gm4340L7N2C4 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.92■■□□□ 1.42
Gm4340L7N2C4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Gm4340L7N2C4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Gm4340L7N2C4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm4340L7N2C4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm4340L7N2C4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Gm4340L7N2C4 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.89■■□□□ 1.42
Gm4340L7N2C4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Gm4340L7N2C4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Gm4340L7N2C4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Gm4340L7N2C4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm4340L7N2C4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm4340L7N2C4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm4340L7N2C4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms