Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pcf11G3X9Z4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pcf11G3X9Z4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Pcf11G3X9Z4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Pcf11G3X9Z4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Pcf11G3X9Z4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pcf11G3X9Z4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Gm10571-201ENSMUST00000097869 1638 ntBASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Reep4-203ENSMUST00000226563 1444 ntBASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pcf11G3X9Z4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Pcf11G3X9Z4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
Pcf11G3X9Z4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pcf11G3X9Z4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Pcf11G3X9Z4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Pcf11G3X9Z4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Pcf11G3X9Z4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcf11G3X9Z4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 Ap3s1-204ENSMUST00000225520 957 ntBASIC30.71■■■□□ 2.51
Pcf11G3X9Z4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Pcf11G3X9Z4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC30.7■■■□□ 2.51
Pcf11G3X9Z4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
Pcf11G3X9Z4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Pcf11G3X9Z4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Pcf11G3X9Z4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Pcf11G3X9Z4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pcf11G3X9Z4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pcf11G3X9Z4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Pcf11G3X9Z4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Gm27011-201ENSMUST00000182352 972 ntBASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pcf11G3X9Z4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Pcf11G3X9Z4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pcf11G3X9Z4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC30.67■■■□□ 2.5
Pcf11G3X9Z4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pcf11G3X9Z4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC30.67■■■□□ 2.5
Pcf11G3X9Z4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Pcf11G3X9Z4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Gm13234-201ENSMUST00000120010 747 ntBASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcf11G3X9Z4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Pcf11G3X9Z4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcf11G3X9Z4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcf11G3X9Z4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pcf11G3X9Z4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Pcf11G3X9Z4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Pcf11G3X9Z4 Gm12504-201ENSMUST00000120860 2231 ntBASIC30.64■■■□□ 2.5
Pcf11G3X9Z4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Pcf11G3X9Z4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Pcf11G3X9Z4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC30.64■■■□□ 2.49
Pcf11G3X9Z4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcf11G3X9Z4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Pcf11G3X9Z4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Pcf11G3X9Z4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms