Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf4lE9Q2N0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf4lE9Q2N0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpsf4lE9Q2N0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cpsf4lE9Q2N0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Cpsf4lE9Q2N0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf4lE9Q2N0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf4lE9Q2N0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpsf4lE9Q2N0 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Gm43137-201ENSMUST00000198052 594 ntBASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpsf4lE9Q2N0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cpsf4lE9Q2N0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf4lE9Q2N0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
Cpsf4lE9Q2N0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms