Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh17E9PXF0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Gm5874-201ENSMUST00000096101 508 ntBASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh17E9PXF0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh17E9PXF0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh17E9PXF0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 Gm43060-201ENSMUST00000200621 289 ntBASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh17E9PXF0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh17E9PXF0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh17E9PXF0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Smad6-203ENSMUST00000179458 273 ntBASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh17E9PXF0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Gm40848-201ENSMUST00000221998 324 ntBASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh17E9PXF0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms