Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp27D3YV89 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.71■□□□□ 0.27
Mmp27D3YV89 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp27D3YV89 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp27D3YV89 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Mmp27D3YV89 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.7■□□□□ 0.26
Mmp27D3YV89 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp27D3YV89 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Rarb-207ENSMUST00000225921 2756 ntBASIC16.69■□□□□ 0.26
Mmp27D3YV89 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.69■□□□□ 0.26
Mmp27D3YV89 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp27D3YV89 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Rps24-207ENSMUST00000224568 714 ntBASIC16.68■□□□□ 0.26
Mmp27D3YV89 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp27D3YV89 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
Mmp27D3YV89 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Mmp27D3YV89 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp27D3YV89 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Mmp27D3YV89 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.65■□□□□ 0.26
Mmp27D3YV89 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp27D3YV89 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp27D3YV89 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms