Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Gm9959-201ENSMUST00000068277 390 ntBASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Golph3-202ENSMUST00000226517 2359 ntBASIC17.58■□□□□ 0.4
Trav12-2A0N8N6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-2A0N8N6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-2A0N8N6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Gm22238-201ENSMUST00000175222 88 ntBASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav12-2A0N8N6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-2A0N8N6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-2A0N8N6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav12-2A0N8N6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-2A0N8N6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-2A0N8N6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav12-2A0N8N6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav12-2A0N8N6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav12-2A0N8N6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms