Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Slc6a21A0A1B0GSD2 Gm27801-201ENSMUST00000184174 223 ntBASIC21.83■■□□□ 1.09
Slc6a21A0A1B0GSD2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.83■■□□□ 1.09
Slc6a21A0A1B0GSD2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.83■■□□□ 1.09
Slc6a21A0A1B0GSD2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc6a21A0A1B0GSD2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Slc6a21A0A1B0GSD2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc6a21A0A1B0GSD2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a21A0A1B0GSD2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Slc6a21A0A1B0GSD2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a21A0A1B0GSD2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a21A0A1B0GSD2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a21A0A1B0GSD2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a21A0A1B0GSD2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a21A0A1B0GSD2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a21A0A1B0GSD2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a21A0A1B0GSD2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a21A0A1B0GSD2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a21A0A1B0GSD2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Slc6a21A0A1B0GSD2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slc6a21A0A1B0GSD2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.77■■□□□ 1.07
Slc6a21A0A1B0GSD2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Slc6a21A0A1B0GSD2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a21A0A1B0GSD2 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.76■■□□□ 1.07
Slc6a21A0A1B0GSD2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a21A0A1B0GSD2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a21A0A1B0GSD2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a21A0A1B0GSD2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 Gm7514-201ENSMUST00000209475 934 ntBASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Slc6a21A0A1B0GSD2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a21A0A1B0GSD2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a21A0A1B0GSD2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms