Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv29A0A0G2LB96 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Gm7143-201ENSMUST00000222811 859 ntBASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv29A0A0G2LB96 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv29A0A0G2LB96 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv29A0A0G2LB96 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv29A0A0G2LB96 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv29A0A0G2LB96 Gm5921-201ENSMUST00000075898 882 ntBASIC16.52■□□□□ 0.24
Trbv29A0A0G2LB96 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv29A0A0G2LB96 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv29A0A0G2LB96 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv29A0A0G2LB96 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv29A0A0G2LB96 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Cap2-205ENSMUST00000225824 1634 ntBASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv29A0A0G2LB96 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Gm10232-201ENSMUST00000089221 720 ntBASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv29A0A0G2LB96 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv29A0A0G2LB96 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv29A0A0G2LB96 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv29A0A0G2LB96 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv29A0A0G2LB96 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
Trbv29A0A0G2LB96 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv29A0A0G2LB96 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv29A0A0G2LB96 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv29A0A0G2LB96 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv29A0A0G2LB96 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv29A0A0G2LB96 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms