Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav9d-4A0A0G2JG37 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9d-4A0A0G2JG37 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9d-4A0A0G2JG37 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9d-4A0A0G2JG37 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9d-4A0A0G2JG37 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms