Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav23A0A0G2JG17 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav23A0A0G2JG17 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav23A0A0G2JG17 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trav23A0A0G2JG17 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav23A0A0G2JG17 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav23A0A0G2JG17 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav23A0A0G2JG17 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav23A0A0G2JG17 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Gm43530-201ENSMUST00000195920 274 ntBASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav23A0A0G2JG17 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms