Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv3A0A0A6YYE2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trbv3A0A0A6YYE2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv3A0A0A6YYE2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Gm16437-201ENSMUST00000025669 507 ntBASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv3A0A0A6YYE2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv3A0A0A6YYE2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trbv3A0A0A6YYE2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Trbv3A0A0A6YYE2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trbv3A0A0A6YYE2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
Trbv3A0A0A6YYE2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv3A0A0A6YYE2 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.33■□□□□ 0.05
Trbv3A0A0A6YYE2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv3A0A0A6YYE2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Scarna2-201ENSMUST00000157560 414 ntBASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv3A0A0A6YYE2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv3A0A0A6YYE2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trbv3A0A0A6YYE2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv3A0A0A6YYE2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms