Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.93■□□□□ 0.46
Gm28557A0A087WQQ0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Gm45444-201ENSMUST00000211394 898 ntBASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28557A0A087WQQ0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28557A0A087WQQ0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28557A0A087WQQ0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.89■□□□□ 0.46
Gm28557A0A087WQQ0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28557A0A087WQQ0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Gm13238-201ENSMUST00000117655 780 ntBASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.88■□□□□ 0.45
Gm28557A0A087WQQ0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Gm28557A0A087WQQ0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28557A0A087WQQ0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28557A0A087WQQ0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.84■□□□□ 0.45
Gm28557A0A087WQQ0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.84■□□□□ 0.45
Gm28557A0A087WQQ0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28557A0A087WQQ0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28557A0A087WQQ0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28557A0A087WQQ0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28557A0A087WQQ0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28557A0A087WQQ0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28557A0A087WQQ0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28557A0A087WQQ0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28557A0A087WQQ0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Gm28557A0A087WQQ0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms