Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-5A0A075B6B9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-5A0A075B6B9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6d-5A0A075B6B9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6d-5A0A075B6B9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav6d-5A0A075B6B9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-5A0A075B6B9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-5A0A075B6B9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-5A0A075B6B9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-5A0A075B6B9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6d-5A0A075B6B9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6d-5A0A075B6B9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav6d-5A0A075B6B9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6d-5A0A075B6B9 Golph3-205ENSMUST00000228671 2842 ntBASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6d-5A0A075B6B9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6d-5A0A075B6B9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms