Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13-1A0A075B644 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13-1A0A075B644 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13-1A0A075B644 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13-1A0A075B644 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13-1A0A075B644 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav13-1A0A075B644 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Mir7075-201ENSMUST00000184187 82 ntBASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Serp2-204ENSMUST00000228055 705 ntBASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-1A0A075B644 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13-1A0A075B644 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13-1A0A075B644 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13-1A0A075B644 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Gm8493-201ENSMUST00000196881 489 ntBASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13-1A0A075B644 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms