Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav12n-2A0A075B626 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12n-2A0A075B626 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12n-2A0A075B626 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav12n-2A0A075B626 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Gm45417-201ENSMUST00000209533 758 ntBASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav12n-2A0A075B626 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav12n-2A0A075B626 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav12n-2A0A075B626 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav12n-2A0A075B626 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav12n-2A0A075B626 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12n-2A0A075B626 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12n-2A0A075B626 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav12n-2A0A075B626 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12n-2A0A075B626 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12n-2A0A075B626 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trav12n-2A0A075B626 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Mir7075-201ENSMUST00000184187 82 ntBASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Spcs1-204ENSMUST00000226782 949 ntBASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav12n-2A0A075B626 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav12n-2A0A075B626 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Gm12251-201ENSMUST00000117893 792 ntBASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12n-2A0A075B626 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Trav12n-2A0A075B626 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12n-2A0A075B626 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms