Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav4d-3A0A075B625 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav4d-3A0A075B625 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav4d-3A0A075B625 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4d-3A0A075B625 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav4d-3A0A075B625 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4d-3A0A075B625 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4d-3A0A075B625 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4d-3A0A075B625 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4d-3A0A075B625 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4d-3A0A075B625 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4d-3A0A075B625 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms