Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trav4n-4A0A075B615 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.83□□□□□ -0.19
Trav4n-4A0A075B615 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4n-4A0A075B615 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4n-4A0A075B615 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4n-4A0A075B615 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Mir3960-201ENSMUST00000198213 73 ntBASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav4n-4A0A075B615 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4n-4A0A075B615 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4n-4A0A075B615 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav4n-4A0A075B615 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav4n-4A0A075B615 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav4n-4A0A075B615 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav4n-4A0A075B615 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav4n-4A0A075B615 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav4n-4A0A075B615 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms