Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-6A0A075B603 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Golph3-205ENSMUST00000228671 2842 ntBASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-6A0A075B603 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-6A0A075B603 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-6A0A075B603 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-6A0A075B603 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-6A0A075B603 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms