Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.82■□□□□ 0.44
Ighv1-54A0A075B5W5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-54A0A075B5W5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-54A0A075B5W5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-54A0A075B5W5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-54A0A075B5W5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-54A0A075B5W5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-54A0A075B5W5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-54A0A075B5W5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ighv1-54A0A075B5W5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-54A0A075B5W5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-54A0A075B5W5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv1-54A0A075B5W5 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.77■□□□□ 0.43
Ighv1-54A0A075B5W5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Gm43137-201ENSMUST00000198052 594 ntBASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Ighv1-54A0A075B5W5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-54A0A075B5W5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-54A0A075B5W5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms