Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm8162-201ENSMUST00000213951 665 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm6859-201ENSMUST00000218614 989 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 CU025215.1-201ENSMUST00000222986 603 ntBASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nkx6-1Q99MA9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm14201-201ENSMUST00000117627 289 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm11893-201ENSMUST00000117829 491 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm15031-201ENSMUST00000121341 210 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm44236-201ENSMUST00000204492 513 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm16477-201ENSMUST00000085365 801 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm17415-201ENSMUST00000096427 789 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nkx6-1Q99MA9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms