Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm43795-201ENSMUST00000202051 2366 ntBASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccdc28bQ8CEG5 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm44062-201ENSMUST00000203312 4857 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm16518-201ENSMUST00000117960 508 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm15352-201ENSMUST00000118696 270 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm11736-201ENSMUST00000121468 505 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Gm37843-201ENSMUST00000195213 2639 ntBASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 AC168276.1-201ENSMUST00000218963 2385 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 C1ra-201ENSMUST00000068593 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ccdc28bQ8CEG5 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm44745-201ENSMUST00000206563 2723 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Cpsf3-201ENSMUST00000067284 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm13422-201ENSMUST00000118834 504 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm5244-201ENSMUST00000164001 339 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm43630-201ENSMUST00000201550 776 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm44315-201ENSMUST00000203041 219 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm45186-201ENSMUST00000206874 478 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Gm45398-201ENSMUST00000210561 165 ntBASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ccdc28bQ8CEG5 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms