Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Gm18806-201ENSMUST00000207607 1775 ntBASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Gm44755-201ENSMUST00000207830 2102 ntBASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pabpn1Q8CCS6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm24039-201ENSMUST00000157878 132 ntBASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Car1-203ENSMUST00000181860 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm6069-201ENSMUST00000196501 463 ntBASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm17815-201ENSMUST00000198305 895 ntBASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm18118-201ENSMUST00000201064 645 ntBASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gm8083-201ENSMUST00000203976 475 ntBASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 AC154431.1-201ENSMUST00000224910 880 ntBASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Ccr6-206ENSMUST00000180103 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.17■□□□□ 0.18
Pabpn1Q8CCS6 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm22582-201ENSMUST00000102283 94 ntBASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm8310-201ENSMUST00000117526 1193 ntBASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm45538-201ENSMUST00000210771 1061 ntTSL 5 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pabpn1Q8CCS6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm17026-201ENSMUST00000166674 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm17124-201ENSMUST00000168320 1379 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm8752-201ENSMUST00000173427 1694 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm14239-201ENSMUST00000116491 685 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm11514-201ENSMUST00000117670 432 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm23081-201ENSMUST00000157845 297 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm17868-201ENSMUST00000192761 668 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm43664-201ENSMUST00000196038 734 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm42538-202ENSMUST00000199431 358 ntTSL 3 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm44198-201ENSMUST00000203063 2636 ntBASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm33858-201ENSMUST00000216918 1411 ntTSL 5 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pabpn1Q8CCS6 Gm21115-201ENSMUST00000187565 2578 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms