Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm14231-201ENSMUST00000120090 592 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm24312-201ENSMUST00000178677 119 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm7583-201ENSMUST00000182941 1005 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm28324-201ENSMUST00000187913 264 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm45120-201ENSMUST00000208880 408 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm25514-201ENSMUST00000083860 135 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim9Q8C7M3 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm26943-201ENSMUST00000182295 957 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm38210-201ENSMUST00000191944 809 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm43564-201ENSMUST00000196185 211 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm6069-201ENSMUST00000196501 463 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm3793-201ENSMUST00000204973 672 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm45219-201ENSMUST00000205602 465 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms