Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm45085-201ENSMUST00000209100 441 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Atf7-201ENSMUST00000096143 390 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pcdh19Q80TF3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm13094-201ENSMUST00000117930 409 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm13857-201ENSMUST00000139645 173 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm24346-201ENSMUST00000158712 194 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm3344-201ENSMUST00000169610 603 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms