Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 2410021H03Rik-201ENSMUST00000187090 764 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gm28196-201ENSMUST00000187719 640 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gm37201-201ENSMUST00000191845 523 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gm42612-201ENSMUST00000197986 623 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gm43170-201ENSMUST00000199827 612 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Gm21358-201ENSMUST00000191645 1659 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Clstn3-201ENSMUST00000008297 4014 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Trim63Q38HM4 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim63Q38HM4 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC8.64□□□□□ -1.03
Trim63Q38HM4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm37583-201ENSMUST00000195460 2487 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Mark1-201ENSMUST00000027929 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm17249-201ENSMUST00000181277 3500 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm8213-201ENSMUST00000118191 441 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm15321-201ENSMUST00000121290 288 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Proscos-202ENSMUST00000178990 666 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Mir7654-201ENSMUST00000185082 70 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm28937-201ENSMUST00000185413 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm29400-201ENSMUST00000187208 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm28662-201ENSMUST00000188446 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm28251-201ENSMUST00000188835 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm37318-201ENSMUST00000194325 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm38017-201ENSMUST00000194768 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm37287-201ENSMUST00000195449 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm37793-201ENSMUST00000195548 695 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm44712-201ENSMUST00000206250 1076 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Thoc7-209ENSMUST00000225325 765 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ccdc162-201ENSMUST00000019955 1891 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Bmf-202ENSMUST00000110859 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm36752-201ENSMUST00000220527 1546 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Agxt2-201ENSMUST00000022858 1825 ntTSL 2 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Cep63-206ENSMUST00000162655 4180 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ttc5-202ENSMUST00000226768 2366 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.63□□□□□ -1.03
Trim63Q38HM4 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms