Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm26013-201ENSMUST00000104404 119 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.56□□□□□ -0.88
Rfx3P48381 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Mir1893-201ENSMUST00000122565 83 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm25661-201ENSMUST00000157704 296 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gm25554-201ENSMUST00000158075 113 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gm9369-201ENSMUST00000196009 733 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm44126-201ENSMUST00000204831 514 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Rfx3P48381 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm23680-201ENSMUST00000083162 164 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Rfx3P48381 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Rfx3P48381 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Rfx3P48381 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Gm11667-201ENSMUST00000119828 486 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Gm12516-201ENSMUST00000120819 385 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm9358-201ENSMUST00000183067 927 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Mir7076-201ENSMUST00000183519 74 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm40414-201ENSMUST00000197608 481 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Gm42816-201ENSMUST00000198433 325 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm19091-201ENSMUST00000208120 978 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.55□□□□□ -0.88
Rfx3P48381 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rfx3P48381 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rfx3P48381 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Rfx3P48381 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.55□□□□□ -0.88
Rfx3P48381 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rfx3P48381 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms