Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.26□□□□□ -0.93
Upk2P38575 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Upk2P38575 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Upk2P38575 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 Gm14234-201ENSMUST00000119539 845 ntBASIC9.26□□□□□ -0.93
Upk2P38575 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.26□□□□□ -0.93
Upk2P38575 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.26□□□□□ -0.93
Upk2P38575 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Upk2P38575 Gm23153-201ENSMUST00000175323 313 ntBASIC9.26□□□□□ -0.93
Upk2P38575 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Upk2P38575 BC106175-202ENSMUST00000219344 1213 ntBASIC9.26□□□□□ -0.93
Upk2P38575 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.26□□□□□ -0.93
Upk2P38575 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Upk2P38575 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Upk2P38575 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.26□□□□□ -0.93
Upk2P38575 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.26□□□□□ -0.93
Upk2P38575 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Upk2P38575 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.25□□□□□ -0.93
Upk2P38575 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.25□□□□□ -0.93
Upk2P38575 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.25□□□□□ -0.93
Upk2P38575 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.25□□□□□ -0.93
Upk2P38575 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Gm19566-201ENSMUST00000199576 610 ntBASIC9.25□□□□□ -0.93
Upk2P38575 Gm4903-201ENSMUST00000210462 405 ntBASIC9.25□□□□□ -0.93
Upk2P38575 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.25□□□□□ -0.93
Upk2P38575 AC161172.1-201ENSMUST00000227801 486 ntBASIC9.25□□□□□ -0.93
Upk2P38575 AC164883.7-201ENSMUST00000228534 851 ntBASIC9.25□□□□□ -0.93
Upk2P38575 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Upk2P38575 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC9.25□□□□□ -0.93
Upk2P38575 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Upk2P38575 Atf7-201ENSMUST00000096143 390 ntBASIC9.25□□□□□ -0.93
Upk2P38575 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.25□□□□□ -0.93
Upk2P38575 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.25□□□□□ -0.93
Upk2P38575 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Upk2P38575 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Upk2P38575 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Upk2P38575 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms