Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.19□□□□□ -0.94
UbbP0CG49 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
UbbP0CG49 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Gm15554-201ENSMUST00000120406 913 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.19□□□□□ -0.94
UbbP0CG49 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.19□□□□□ -0.94
UbbP0CG49 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm29543-201ENSMUST00000188138 967 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Gm3551-201ENSMUST00000190750 664 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Gm6677-201ENSMUST00000195100 441 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm44551-201ENSMUST00000208804 171 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC9.19□□□□□ -0.94
UbbP0CG49 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.19□□□□□ -0.94
UbbP0CG49 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
UbbP0CG49 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
UbbP0CG49 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
UbbP0CG49 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
UbbP0CG49 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
UbbP0CG49 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.18□□□□□ -0.94
UbbP0CG49 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm12165-201ENSMUST00000117047 342 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 Gm12663-201ENSMUST00000118481 958 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm4726-201ENSMUST00000135604 736 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 Gm6019-201ENSMUST00000148369 736 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
UbbP0CG49 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.18□□□□□ -0.94
UbbP0CG49 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.18□□□□□ -0.94
UbbP0CG49 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
UbbP0CG49 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
UbbP0CG49 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms