Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm12389-201ENSMUST00000117696 418 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm11411-201ENSMUST00000117951 719 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm23555-201ENSMUST00000157815 135 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm22730-201ENSMUST00000158085 171 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm23899-201ENSMUST00000158112 90 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm17221-201ENSMUST00000163909 481 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm17073-201ENSMUST00000168069 556 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm26238-201ENSMUST00000175538 117 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm43103-201ENSMUST00000199021 802 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm42867-201ENSMUST00000202995 469 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm8255-201ENSMUST00000218693 305 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 AC183092.2-201ENSMUST00000225542 1153 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 AC123735.1-201ENSMUST00000227358 605 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.98□□□□□ -0.65
Hoxb3P09026 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.98□□□□□ -0.65
Hoxb3P09026 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hoxb3P09026 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm6881-201ENSMUST00000121811 833 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm24239-201ENSMUST00000157791 255 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Snord55-201ENSMUST00000174939 79 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm9023-201ENSMUST00000198408 1038 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm44837-201ENSMUST00000206863 717 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm44917-201ENSMUST00000208798 520 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm8170-201ENSMUST00000218581 945 ntBASIC10.97□□□□□ -0.65
Hoxb3P09026 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hoxb3P09026 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC10.97□□□□□ -0.65
Hoxb3P09026 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.97□□□□□ -0.65
Hoxb3P09026 AC164597.1-201ENSMUST00000226538 514 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms