Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.13□□□□□ -0.95
H3f3cP02301 Gm44216-201ENSMUST00000203942 157 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Gm19091-201ENSMUST00000208120 978 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Gm18035-201ENSMUST00000211962 589 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
H3f3cP02301 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.13□□□□□ -0.95
H3f3cP02301 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
H3f3cP02301 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.13□□□□□ -0.95
H3f3cP02301 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
H3f3cP02301 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.12□□□□□ -0.95
H3f3cP02301 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm11560-201ENSMUST00000117567 948 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Gm16518-201ENSMUST00000117960 508 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Gm14219-201ENSMUST00000120414 288 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm8194-201ENSMUST00000159783 859 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Mir7035-201ENSMUST00000184713 82 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Gm38313-201ENSMUST00000191953 1266 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Gm42859-201ENSMUST00000199572 193 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Gm3793-201ENSMUST00000204973 672 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.12□□□□□ -0.95
H3f3cP02301 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm26670-202ENSMUST00000226862 340 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm8181-201ENSMUST00000062242 669 ntBASIC9.12□□□□□ -0.95
H3f3cP02301 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
H3f3cP02301 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
H3f3cP02301 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
H3f3cP02301 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.12□□□□□ -0.95
H3f3cP02301 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.12□□□□□ -0.95
H3f3cP02301 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
H3f3cP02301 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms