Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm22379-201ENSMUST00000157480 131 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm28032-201ENSMUST00000184104 96 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm3619-201ENSMUST00000219947 775 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm14807-201ENSMUST00000116640 983 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm9081-201ENSMUST00000182346 991 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm19927-201ENSMUST00000185792 781 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm28324-201ENSMUST00000187913 264 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm44814-201ENSMUST00000207018 434 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp11Q99K46 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.16□□□□□ -0.62
Usp11Q99K46 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Usp11Q99K46 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Usp11Q99K46 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Usp11Q99K46 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.15□□□□□ -0.62
Usp11Q99K46 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Usp11Q99K46 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms