Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.01□□□□□ -0.81
Clrn1Q8K445 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm11560-201ENSMUST00000117567 948 ntBASIC10.01□□□□□ -0.81
Clrn1Q8K445 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm16288-201ENSMUST00000137940 367 ntBASIC10.01□□□□□ -0.81
Clrn1Q8K445 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm45258-201ENSMUST00000210042 853 ntBASIC10.01□□□□□ -0.81
Clrn1Q8K445 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm26670-202ENSMUST00000226862 340 ntBASIC10.01□□□□□ -0.81
Clrn1Q8K445 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.01□□□□□ -0.81
Clrn1Q8K445 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Clrn1Q8K445 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm38273-201ENSMUST00000194987 2382 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm12795-201ENSMUST00000117594 539 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Gm11411-201ENSMUST00000117951 719 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10□□□□□ -0.81
Clrn1Q8K445 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm24248-201ENSMUST00000157321 322 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Gm9372-201ENSMUST00000168454 430 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Gm24809-201ENSMUST00000175318 271 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10□□□□□ -0.81
Clrn1Q8K445 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm45120-201ENSMUST00000208880 408 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Gm31941-201ENSMUST00000209689 350 ntBASIC10□□□□□ -0.81
Clrn1Q8K445 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10□□□□□ -0.81
Clrn1Q8K445 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10□□□□□ -0.81
Clrn1Q8K445 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10□□□□□ -0.81
Clrn1Q8K445 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Clrn1Q8K445 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10□□□□□ -0.81
Clrn1Q8K445 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10□□□□□ -0.81
Clrn1Q8K445 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms