Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Sh3rf2Q8BZT2 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.77□□□□□ -0.68
Sh3rf2Q8BZT2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sh3rf2Q8BZT2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm8482-201ENSMUST00000117972 471 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm13841-201ENSMUST00000118829 483 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm11449-201ENSMUST00000119175 476 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm8210-201ENSMUST00000178557 483 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm15454-201ENSMUST00000179718 483 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm26943-201ENSMUST00000182295 957 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm37301-201ENSMUST00000195412 568 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm42689-201ENSMUST00000202403 404 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm44487-201ENSMUST00000205145 325 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm3791-201ENSMUST00000220790 768 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm6344-201ENSMUST00000075962 483 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sh3rf2Q8BZT2 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm42859-201ENSMUST00000199572 193 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Gm7242-201ENSMUST00000221134 705 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sh3rf2Q8BZT2 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms