Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm6158-201ENSMUST00000109467 904 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm14219-201ENSMUST00000120414 288 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm17221-201ENSMUST00000163909 481 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm17073-201ENSMUST00000168069 556 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm19091-201ENSMUST00000208120 978 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm10752-201ENSMUST00000218348 729 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Gm18968-201ENSMUST00000221319 862 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Syne3Q4FZC9 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.27□□□□□ -0.6
Syne3Q4FZC9 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Syne3Q4FZC9 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm11380-201ENSMUST00000118067 560 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm13351-201ENSMUST00000118087 414 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Mir8091-201ENSMUST00000183602 139 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm40414-201ENSMUST00000197608 481 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm5865-201ENSMUST00000198713 637 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm44216-201ENSMUST00000203942 157 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm33080-201ENSMUST00000205429 172 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm5178-201ENSMUST00000219380 898 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Gm16380-201ENSMUST00000077997 478 ntBASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.27□□□□□ -0.61
Syne3Q4FZC9 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms