Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm12389-201ENSMUST00000117696 418 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm11451-201ENSMUST00000118946 630 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm11667-201ENSMUST00000119828 486 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm3828-201ENSMUST00000121817 257 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm12208-201ENSMUST00000122004 163 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm11988-201ENSMUST00000122321 1069 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm27910-201ENSMUST00000185004 107 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm45219-201ENSMUST00000205602 465 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Snora73b-201ENSMUST00000083419 205 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 AC125351.1-201ENSMUST00000221438 2223 ntBASIC11.23□□□□□ -0.61
Trim43aQ3TL54 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm25343-201ENSMUST00000157460 107 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm6485-201ENSMUST00000160676 439 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Mir8115-201ENSMUST00000184992 119 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm37299-201ENSMUST00000193951 826 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm44126-201ENSMUST00000204831 514 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm8285-201ENSMUST00000208293 759 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms