Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Mir6979-201ENSMUST00000183927 56 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm27953-201ENSMUST00000185171 143 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm42710-201ENSMUST00000200608 985 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm44814-201ENSMUST00000207018 434 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm39288-201ENSMUST00000210554 446 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Snora73b-201ENSMUST00000083419 205 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 AC115746.1-201ENSMUST00000228949 3617 ntBASIC11.74□□□□□ -0.53
Hmgb1P63158 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgb1P63158 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Hmgb1P63158 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgb1P63158 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm42837-201ENSMUST00000197071 2829 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Mir453-201ENSMUST00000104732 82 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Mir8091-201ENSMUST00000183602 139 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm17877-201ENSMUST00000192578 814 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm42521-201ENSMUST00000199190 2040 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm9463-201ENSMUST00000206707 601 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgb1P63158 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.73□□□□□ -0.53
Hmgb1P63158 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgb1P63158 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmgb1P63158 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmgb1P63158 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.72□□□□□ -0.53
Hmgb1P63158 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hmgb1P63158 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgb1P63158 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms