Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm24398-201ENSMUST00000157870 109 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rfx3P48381 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rfx3P48381 Snora73b-201ENSMUST00000083419 205 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Rfx3P48381 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.58□□□□□ -0.88
Rfx3P48381 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm15264-201ENSMUST00000118050 502 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Gm12274-201ENSMUST00000120062 385 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Gm3828-201ENSMUST00000121817 257 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm27438-201ENSMUST00000183480 110 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Mir7032-201ENSMUST00000185154 79 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Gm43380-201ENSMUST00000200421 220 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Gm30671-201ENSMUST00000214898 318 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rfx3P48381 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rfx3P48381 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.57□□□□□ -0.88
Rfx3P48381 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.57□□□□□ -0.88
Rfx3P48381 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rfx3P48381 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.56□□□□□ -0.88
Rfx3P48381 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Rfx3P48381 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.56□□□□□ -0.88
Rfx3P48381 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms