Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.85□□□□□ -0.99
Col8a2P25318 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col8a2P25318 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col8a2P25318 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC8.85□□□□□ -0.99
Col8a2P25318 Gm8482-201ENSMUST00000117972 471 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm13841-201ENSMUST00000118829 483 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm11449-201ENSMUST00000119175 476 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm12943-201ENSMUST00000119616 210 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC8.85□□□□□ -0.99
Col8a2P25318 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC8.85□□□□□ -0.99
Col8a2P25318 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Gm8210-201ENSMUST00000178557 483 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm15454-201ENSMUST00000179718 483 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Col8a2P25318 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm5254-201ENSMUST00000188353 977 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC8.85□□□□□ -0.99
Col8a2P25318 Gm38313-201ENSMUST00000191953 1266 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm3527-201ENSMUST00000198905 460 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm45363-201ENSMUST00000210196 1294 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.85□□□□□ -0.99
Col8a2P25318 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC8.85□□□□□ -0.99
Col8a2P25318 CT009713.2-201ENSMUST00000225532 1149 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 AC174797.2-201ENSMUST00000225835 165 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 AC154436.1-201ENSMUST00000227272 782 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Gm6344-201ENSMUST00000075962 483 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC8.85□□□□□ -0.99
Col8a2P25318 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col8a2P25318 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.85□□□□□ -0.99
Col8a2P25318 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm11502-201ENSMUST00000120917 1211 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Gm5526-201ENSMUST00000153604 423 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Gm26368-201ENSMUST00000157826 118 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm37390-201ENSMUST00000192452 872 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Gm37197-201ENSMUST00000195607 401 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm7939-201ENSMUST00000201233 1050 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 BC080696-201ENSMUST00000202858 1218 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 Gm44369-201ENSMUST00000204543 2175 ntBASIC8.84□□□□□ -0.99
Col8a2P25318 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Col8a2P25318 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col8a2P25318 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC8.84□□□□□ -0.99
Col8a2P25318 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms