Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm9129-201ENSMUST00000218173 1689 ntBASIC7.71□□□□□ -1.18
TcraP01849 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Gm12380-201ENSMUST00000119012 544 ntBASIC7.71□□□□□ -1.18
TcraP01849 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC7.71□□□□□ -1.18
TcraP01849 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC7.71□□□□□ -1.18
TcraP01849 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC7.71□□□□□ -1.18
TcraP01849 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC7.71□□□□□ -1.18
TcraP01849 Gm43058-201ENSMUST00000197645 625 ntBASIC7.71□□□□□ -1.18
TcraP01849 Gm2965-201ENSMUST00000198365 343 ntBASIC7.71□□□□□ -1.18
TcraP01849 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC7.71□□□□□ -1.18
TcraP01849 Gm18212-201ENSMUST00000211678 889 ntBASIC7.71□□□□□ -1.18
TcraP01849 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
TcraP01849 CT485787.1-201ENSMUST00000225617 968 ntBASIC7.71□□□□□ -1.18
TcraP01849 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TcraP01849 AC124561.1-202ENSMUST00000228652 1929 ntBASIC7.71□□□□□ -1.18
TcraP01849 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TcraP01849 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC7.71□□□□□ -1.18
TcraP01849 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Gm19409-201ENSMUST00000198244 2858 ntBASIC7.71□□□□□ -1.18
TcraP01849 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TcraP01849 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Clip1-201ENSMUST00000031382 4387 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TcraP01849 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TcraP01849 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TcraP01849 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Gm21142-201ENSMUST00000179999 2604 ntBASIC7.7□□□□□ -1.18
TcraP01849 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 AC154849.3-201ENSMUST00000223733 1660 ntBASIC7.7□□□□□ -1.18
TcraP01849 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Gm37651-201ENSMUST00000194679 1494 ntBASIC7.7□□□□□ -1.18
TcraP01849 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
TcraP01849 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC7.7□□□□□ -1.18
TcraP01849 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC7.7□□□□□ -1.18
TcraP01849 Gm14277-201ENSMUST00000121195 360 ntBASIC7.7□□□□□ -1.18
TcraP01849 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TcraP01849 Gm25881-201ENSMUST00000157783 103 ntBASIC7.7□□□□□ -1.18
TcraP01849 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC7.7□□□□□ -1.18
TcraP01849 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
TcraP01849 Gm38151-201ENSMUST00000195085 289 ntBASIC7.7□□□□□ -1.18
TcraP01849 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC7.7□□□□□ -1.18
TcraP01849 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC7.7□□□□□ -1.18
TcraP01849 Gm6108-201ENSMUST00000208365 367 ntBASIC7.7□□□□□ -1.18
TcraP01849 Gm45575-201ENSMUST00000210283 548 ntBASIC7.7□□□□□ -1.18
TcraP01849 Gm45310-201ENSMUST00000210436 275 ntBASIC7.7□□□□□ -1.18
TcraP01849 AC107638.1-201ENSMUST00000213690 1061 ntBASIC7.7□□□□□ -1.18
TcraP01849 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Gm43820-201ENSMUST00000199414 3346 ntBASIC7.7□□□□□ -1.18
TcraP01849 Gm10764-202ENSMUST00000220397 2335 ntBASIC7.7□□□□□ -1.18
TcraP01849 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 AC165080.1-201ENSMUST00000215257 3123 ntBASIC7.7□□□□□ -1.18
TcraP01849 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
TcraP01849 Gm13812-201ENSMUST00000118061 1347 ntBASIC7.7□□□□□ -1.18
TcraP01849 Gm13810-201ENSMUST00000118584 1347 ntBASIC7.7□□□□□ -1.18
TcraP01849 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TcraP01849 Abcc8-201ENSMUST00000033123 4877 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms