Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Snord23-201ENSMUST00000116828 109 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm11451-201ENSMUST00000118946 630 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm15131-201ENSMUST00000119124 595 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm12516-201ENSMUST00000120819 385 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm26134-201ENSMUST00000178484 110 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm37986-201ENSMUST00000193285 383 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm43671-201ENSMUST00000200422 433 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm7742-201ENSMUST00000167648 1527 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm7732-201ENSMUST00000170486 1527 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm7740-201ENSMUST00000186171 1527 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm19680-201ENSMUST00000095050 1513 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm7736-201ENSMUST00000096981 1527 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm44103-201ENSMUST00000204364 3662 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm13104-201ENSMUST00000119651 1446 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm5944-201ENSMUST00000118182 1001 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12616-201ENSMUST00000118594 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm14460-201ENSMUST00000121511 639 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm22138-201ENSMUST00000158748 128 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12624-201ENSMUST00000177615 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12621-201ENSMUST00000177760 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12615-201ENSMUST00000177970 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12622-201ENSMUST00000177975 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12627-201ENSMUST00000178412 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12625-201ENSMUST00000179122 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm12614-201ENSMUST00000179586 382 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms