Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx6-1Q99MA9 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm15373-201ENSMUST00000121495 214 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm18124-201ENSMUST00000210695 706 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm8796-201ENSMUST00000219122 936 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm3791-201ENSMUST00000220790 768 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Atf7-201ENSMUST00000096143 390 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx6-1Q99MA9 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm14571-201ENSMUST00000118292 570 ntBASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx6-1Q99MA9 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms