Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm22344-201ENSMUST00000122642 278 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm28064-201ENSMUST00000185639 858 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm6606-201ENSMUST00000193613 947 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm42710-201ENSMUST00000200608 985 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm45071-201ENSMUST00000205353 571 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm2448-201ENSMUST00000207080 559 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm45166-201ENSMUST00000209073 683 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm18001-201ENSMUST00000212023 688 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Gm9791-201ENSMUST00000060997 447 ntBASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Pcdh19Q80TF3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm20414-201ENSMUST00000172918 646 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm6098-201ENSMUST00000180234 330 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm28925-201ENSMUST00000188586 168 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm5708-201ENSMUST00000196289 886 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm6855-201ENSMUST00000206307 790 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm8170-201ENSMUST00000218581 945 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 AC132881.2-201ENSMUST00000225474 709 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm10580-201ENSMUST00000097985 396 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm10582-201ENSMUST00000097987 396 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm10583-201ENSMUST00000097988 396 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms