Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Gm10238-201ENSMUST00000089689 408 ntBASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h1Q4VGL6 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm44286-201ENSMUST00000204098 1487 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm26474-201ENSMUST00000116762 122 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm24380-201ENSMUST00000122696 324 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm26313-201ENSMUST00000157770 308 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm8918-201ENSMUST00000190587 1087 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm7445-201ENSMUST00000192115 340 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm9204-201ENSMUST00000212641 947 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Atf7-201ENSMUST00000096143 390 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rc3h1Q4VGL6 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.4□□□□□ -0.43
Rc3h1Q4VGL6 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.4□□□□□ -0.43
Rc3h1Q4VGL6 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rc3h1Q4VGL6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm25998-201ENSMUST00000175397 53 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm5808-201ENSMUST00000178090 357 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm26736-201ENSMUST00000180425 1236 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm7572-201ENSMUST00000182616 766 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Gm5274-201ENSMUST00000182641 1003 ntBASIC12.39□□□□□ -0.43
Rc3h1Q4VGL6 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms