Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.95□□□□□ -0.66
Sox1P53783 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Gm42599-201ENSMUST00000201308 469 ntBASIC10.95□□□□□ -0.66
Sox1P53783 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Gm44936-201ENSMUST00000207324 735 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC10.95□□□□□ -0.66
Sox1P53783 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 CT009495.1-201ENSMUST00000224221 862 ntBASIC10.95□□□□□ -0.66
Sox1P53783 AC140393.4-201ENSMUST00000226994 765 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.95□□□□□ -0.66
Sox1P53783 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Gm38309-201ENSMUST00000192063 1518 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox1P53783 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox1P53783 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox1P53783 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Gm25426-201ENSMUST00000157606 170 ntBASIC10.94□□□□□ -0.66
Sox1P53783 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Mir6909-201ENSMUST00000184212 62 ntBASIC10.94□□□□□ -0.66
Sox1P53783 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Gm36943-201ENSMUST00000194422 282 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Gm18165-201ENSMUST00000217426 928 ntBASIC10.94□□□□□ -0.66
Sox1P53783 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC10.94□□□□□ -0.66
Sox1P53783 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Sox1P53783 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox1P53783 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox1P53783 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.94□□□□□ -0.66
Sox1P53783 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms