Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rfx3P48381 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.6□□□□□ -0.87
Rfx3P48381 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Rfx3P48381 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm11952-201ENSMUST00000121172 821 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Gm12208-201ENSMUST00000122004 163 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.59□□□□□ -0.87
Rfx3P48381 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm17877-201ENSMUST00000192578 814 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Gm37852-201ENSMUST00000193027 350 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Gm9463-201ENSMUST00000206707 601 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Rfx3P48381 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Rfx3P48381 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Rfx3P48381 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rfx3P48381 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.59□□□□□ -0.87
Rfx3P48381 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Rfx3P48381 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rfx3P48381 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm13888-201ENSMUST00000119148 422 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 Gm1848-201ENSMUST00000120711 789 ntBASIC9.58□□□□□ -0.88
Rfx3P48381 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.58□□□□□ -0.88
Rfx3P48381 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rfx3P48381 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms