Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.11□□□□□ -0.79
Nkx2-6P43688 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.11□□□□□ -0.79
Nkx2-6P43688 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.11□□□□□ -0.79
Nkx2-6P43688 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Nkx2-6P43688 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm8152-201ENSMUST00000120842 637 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm15258-201ENSMUST00000153801 741 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm25604-201ENSMUST00000158359 133 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm7765-201ENSMUST00000182585 974 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm29543-201ENSMUST00000188138 967 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm7238-201ENSMUST00000206467 973 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Mir326-201ENSMUST00000083637 95 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.1□□□□□ -0.79
Nkx2-6P43688 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Nkx2-6P43688 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nkx2-6P43688 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm43854-201ENSMUST00000200418 394 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.09□□□□□ -0.79
Nkx2-6P43688 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nkx2-6P43688 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms