Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Gm37835-201ENSMUST00000193305 361 ntBASIC9.28□□□□□ -0.92
Cd28P31041 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Gm30946-201ENSMUST00000198288 724 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.28□□□□□ -0.92
Cd28P31041 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Gm18466-201ENSMUST00000209147 499 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Gm1821-202ENSMUST00000227415 750 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cd28P31041 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cd28P31041 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Cd28P31041 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cd28P31041 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cd28P31041 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.28□□□□□ -0.92
Cd28P31041 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cd28P31041 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cd28P31041 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cd28P31041 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Cd28P31041 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Cd28P31041 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.27□□□□□ -0.92
Cd28P31041 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.27□□□□□ -0.93
Cd28P31041 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Mir1893-201ENSMUST00000122565 83 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.27□□□□□ -0.93
Cd28P31041 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.27□□□□□ -0.93
Cd28P31041 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Gm37905-201ENSMUST00000195310 341 ntBASIC9.27□□□□□ -0.93
Cd28P31041 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Gm5599-201ENSMUST00000209602 788 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.27□□□□□ -0.93
Cd28P31041 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Gm5451-201ENSMUST00000080545 579 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cd28P31041 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Cd28P31041 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cd28P31041 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Cd28P31041 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.27□□□□□ -0.93
Cd28P31041 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms