Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC8.71□□□□□ -1.02
Hmgb3O54879 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm25881-201ENSMUST00000157783 103 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Hmgb3O54879 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm23694-201ENSMUST00000179335 110 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm28032-201ENSMUST00000184104 96 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm7399-201ENSMUST00000032395 858 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm38199-201ENSMUST00000192013 3277 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm5766-201ENSMUST00000160520 1977 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb3O54879 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm6170-201ENSMUST00000187672 1388 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm7993-201ENSMUST00000200970 1384 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm44798-201ENSMUST00000208123 2410 ntBASIC8.71□□□□□ -1.02
Hmgb3O54879 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Hmgb3O54879 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb3O54879 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm37583-201ENSMUST00000195460 2487 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm12742-201ENSMUST00000117326 410 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm13996-201ENSMUST00000118456 430 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm12012-201ENSMUST00000118857 1066 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm16505-201ENSMUST00000179981 232 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm8100-201ENSMUST00000182906 988 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Gm7255-201ENSMUST00000187371 908 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC8.7□□□□□ -1.02
Hmgb3O54879 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hmgb3O54879 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb3O54879 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Hmgb3O54879 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms