Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm24398-201ENSMUST00000157870 109 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Mir1943-201ENSMUST00000158276 73 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm44329-201ENSMUST00000197469 112 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm42816-201ENSMUST00000198433 325 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm18753-201ENSMUST00000201000 566 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm19091-201ENSMUST00000208120 978 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Gm3550W4VSN7 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Gm3550W4VSN7 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm13019-201ENSMUST00000120000 276 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm19459-201ENSMUST00000176240 835 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm6677-201ENSMUST00000195100 441 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm39288-201ENSMUST00000210554 446 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm9102-201ENSMUST00000219250 465 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.02□□□□□ -0.97
Gm3550W4VSN7 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3550W4VSN7 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms