Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm19927-201ENSMUST00000185792 781 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm37852-201ENSMUST00000193027 350 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm6677-201ENSMUST00000195100 441 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm8959-201ENSMUST00000213150 571 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm42571-201ENSMUST00000201197 2464 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm17980-201ENSMUST00000217977 2349 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm21115-201ENSMUST00000187565 2578 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm15554-201ENSMUST00000120406 913 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm24398-201ENSMUST00000157870 109 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm16165-201ENSMUST00000160140 795 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm7985-201ENSMUST00000183329 981 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm17877-201ENSMUST00000192578 814 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm5865-201ENSMUST00000198713 637 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm31941-201ENSMUST00000209689 350 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp4cQ9D7F7 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm15264-201ENSMUST00000118050 502 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm13937-201ENSMUST00000121000 988 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm5244-201ENSMUST00000164001 339 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm44155-201ENSMUST00000203923 412 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm44814-201ENSMUST00000207018 434 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms